Search Results - "alpha helix"

Cruise report : R/V Alpha Helix Cruise-173 to western Prince William Sound, Yakutat Bay, and Glacier Bay National Park, northeastern Gulf of Alaska, August 17 - September 3, 1993 by Geological Survey (U.S.)

“…Cruise report, R V Alpha Helix Cruise-173.…”

Methods in protein design. Volume 523 by ScienceDirect (Online service)

Contents: “…Computational design of novel protein binders and experimental affinity maturation -- Mining tertiary structural motifs for assessment of designability -- Computational methods for controlling binding specificity -- Flexible backbone sampling methods to model and design protein alternative conformations -- Osprey: protein design with ensembles, flexibility, and provable algorithms -- Scientific benchmarks for guiding macromolecular energy function improvement -- Molecular dynamics simulations for the ranking, evaluation, and refinement of computationally designed proteins -- Multistate protein design using CLEVER and CLASSY -- Using analyses of amino acid coevolution to understand protein structure and function -- Evolution-based design of proteins -- Protein engineering and stabilization from sequence statistics: variation and covariation analysis -- Enzyme engineering by targeted libraries -- Generation of high-performance binding proteins for pepetide motifs by affinity clamping -- Engineering fibronectin-based binding proteins by yeast surface display -- Engineering and analysis of peptide-recognition domain specificities by phage display and deep sequencing -- Efficient sampling of SCHEMA chimera families to identify useful sequence elements -- Protein switch engineering by domain insertion -- Design of chimeric proteins by combination of subdomain-sized fragments -- [alpha]-helix mimicry with [alpha/beta]-peptides.…”
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Nonlinear dynamics of nanobiophysics by SpringerLink (Online service)

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Peptides : synthesis, structures, and applications by ScienceDirect (Online service)

Contents: “…The history of peptide chemistry / Theodor Wieland -- Amide formation, deprotection, and disulfide formation in peptide synthesis / Yoshiaki Kiso and Haruaki Yajima -- Solid-phase peptide synthesis / Bruce Merrifield -- [alpha]-helix formation by peptides in water / J. Martin Scholtz and Robert L. …”
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Concepts in bioscience engineering by Dods, Richard

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Molecular machines involved in peroxisome biogenesis and maintenance by SpringerLink (Online service)

Contents: “…Protein transport across the peroxisomal membrane: The matrix protein import complex in yeast -- Protein transport in plant peroxisomes -- Concept Exportomer -- Factors involved in ubiquitination/deubiquitination of PEX5 -- Peroxisome dynamics: Trafficking of the peroxisome biogenesis factor PEX3 through the ER -- Role of PEX3 and PEX19 in peroxisome membrane biogenesis -- Vesicles, reticulon and ER-to-peroxisome contact sites -- Pex11 proteins and their alpha-helix -- Molecular complex coordinating peroxisome morphogenesis -- Dynamin-related proteins. …”
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Protein folding and misfolding : shining light by infrared spectroscopy by SpringerLink (Online service)

Contents: “…Brauner and Richard Mendelsohn -- Millisecond-to-minute protein folding/misfolding events monitored by FTIR spectroscopy / Heinz Fabian and Dieter Naumann -- Watching dynamical events in protein folding in the time domain from submilliseconds to seconds : continuous-flow rapid-mixing infrared spectroscopy / Satoshi Takahashi and Tetsunari Kimura -- High-pressure vibrational spectroscopy studies of the folding, misfolding and amyloidogenesis of proteins / Roland Winter, Matthias Pühse, and Jonas Markgraf -- Dynamics of [alpha]-helix and [beta]-sheet formation studied by laser-induced temperature-jump IR spectroscopy / Karin Hauser -- Light-triggered peptide dynamics / Wolfgang Zinth and Josef Wachtveitl -- Time-resolved FTIR spectroscopy of pH-induced aggregation of peptides / John E.T. …”
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Peptide bionanomaterials : from design to application by SpringerLink (Online service)

Contents: “…2.3.3 P11 Peptides and Related Sequences -- 2.3.4 Multidomain Peptides -- 2.4 [beta]-Hairpin Self-Assembling Peptides -- 2.5 Surfactant-Like Peptide Assemblies -- 2.6 Conclusion -- References -- Chapter 3: [alpha]-Helix and Coiled-Coil Peptide Nanomaterials -- 3.1 Scope of This Chapter -- 3.2 De Novo Design of [alpha]-Helical Coiled Coils -- 3.3 [alpha]-Helical Peptide Fibers -- 3.4 [alpha]-Helical Peptide Nanotubes -- 3.5 [alpha]-Helical Peptide Cages and Protein Origami -- 3.6 [alpha]-Helical Peptide Networks and Arrays -- 3.7 Conclusions -- References -- Chapter 4: Ultra-Short Peptide Nanomaterials -- 4.1 Introduction.…”
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The comprehensive sourcebook of bacterial protein toxins 3rd ed. by ScienceDirect (Online service)

Contents: “…Introduction -- A 116-year story of bacterial protein toxins (1888-2004): From diphtheritic poison to molecular toxinology -- Evolutionary aspects of toxin-producing bacteria -- Mobile genetic elements and pathogenicity islands encoding bacterial toxins -- Regulation systems of toxin expression -- Toxin secretion systems -- Intracellular trafficking of bacterial protein toxins -- Translocation of bacterial protein toxin into the cytosol -- Bacterial toxins and virulence factors targeting the actin cytoskeleton and -- intracellular junctions -- Bacterial toxins and mitochondria -- Toxins activating RHO GTPases and exploiting the cellular ubiquitin/proteasome -- machineries -- Toxin receptors -- Molecular, functional and evolutionary aspects of ADP-ribosylating toxins -- Diphtheria toxin -- Attack of the nervous system by clostridial toxins: Physical findings, cellular and -- molecular actions -- Uptake and transport of clostridial neurotoxins -- Bacillus anthracis toxins -- Large clostridial cytotoxins modifying small GTPases -- Bordetella protein toxins -- Vibrio Cholerae and Escherichia Coli thermolabile enterotoxin -- The Shiga toxins: Properties and action on cells -- Helicobacter pylori vacuolating toxin -- Pasteurella multocida toxin -- Cytolethal distending toxins -- Pseudomonas aeruginosa toxins -- Escherichia coli heat- stable enterotoxin b -- Paradigms and classification of bacterial membrane -damaging toxins -- Membrane damaging and cytotoxic phospholipases -- Bacteroides fragilis toxins -- Structure and mode of action of RTX cytolysins -- Genetics and phylogeny of RTX cytolysins -- The family of two-component cytolysins of Serratia and other -- bacteria -- Alpha-helix and Beta-barrel pore-forming toxins (leucocidins, alpha-, gamma- and -- delta-cytolysins) of Staphylococcus aureus -- Aerolysin and related Aeromonas toxins -- Clostridium septicum pore-forming alpha-toxin -- Clostridium perfringens epsilon toxin -- Repertoire and general features of the family of cholesteroldependent cytolysins -- Comparative three-dimensional structure of cholesterol-dependent cytolysins -- Perfringolysin O and Intermedilysin: mechanisms of pore formation by the -- cholesterol-dependent cytolysins -- Pneumolysin: structure, function and role in disease -- Listeriolysin -- Enterococcus faecalis cytolysin toxin -- Streptolysin S: one of the most potent and elusive of all bacterial toxins -- The group B streptococcal beta-haemolysin/cytolysin -- Haemolysins of Vibrio cholerae and other Vibrio species -- Clostridium perfringens enterotoxin -- Bacillus cereus enterotoxins, bi- and tri-component cytolysins and other -- haemolysins -- Uropathogenic Escherichia coli cytolysins -- Escherichia coli, Vibrio and Yersinia species heat-stable enterotoxins -- What are superantigens? …”
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Pattern recognition in bioinformatics : 5th IAPR International Conference, PRIB 2010, Nijmegen, the Netherlands, September 22-24, 2010, proceedings by PRIB (Meeting) Nijmegen, Netherlands), SpringerLink (Online service)

Contents: “…-Sheet Secondary Structure Prediction -- Alpha Helix Prediction Based on Evolutionary Computation -- An On/Off Lattice Approach to Protein Structure Prediction from Contact Maps -- Protein Protein Interaction and Network Inference -- Biological Protein-Protein Interaction Prediction Using Binding Free Energies and Linear Dimensionality Reduction -- Employing Publically Available Biological Expert Knowledge from Protein-Protein Interaction Information -- SFFS-MR: A Floating Search Strategy for GRNs Inference -- Revisiting the Voronoi Description of Protein-Protein Interfaces: Algorithms -- MC4: A Tempering Algorithm for Large-Sample Network Inference -- Flow-Based Bayesian Estimation of Nonlinear Differential Equations for Modeling Biological Networks.…”
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The chemistry book : from gunpowder to graphene, 250 milestones in the history of chemistry by Lowe, Derek B.

Contents: “…c. 500,000 BCE: crystals -- c. 3300 BCE: bronze -- c. 2800 BCE: soap -- c. 1300 BCE: iron smelting -- c. 1200 BCE: purification -- c. 550 BCE: gold refining -- c. 450 BCE: the four elements -- c. 400 BCE: atomism -- 210 BCE: mercury -- c. 60 CE: natural products -- c. 126: Roman concrete -- c. 200: porcelain -- c. 672: Greek fire -- c. 800: the philosopher's stone -- c. 800: Viking steel -- c. 850: gunpowder -- c. 900: alchemy -- c. 1280: aqua regia -- c. 1280: fractional distillation -- 1538: toxicology -- 1540: diethyl ether -- 1556: 'De re metallica' -- 1605: the advancement of learning -- 1607: Yorkshire alum -- 1631: quinine -- 1661: 'The skeptical chymist' -- 1667: phlogiston -- 1669: phosphorus -- 1700: hydrogen sulfide -- c. 1706: Prussian blue -- 1746: sulfuric acid -- 1752: hydrogen cyanide -- 1754: carbon dioxide -- 1758: Cadet's fuming liquid -- 1766: hydrogen -- 1774: oxygen -- 1789: conservation of mass -- 1791: titanium -- 1792: ytterby -- 1804: morphine -- 1805: electroplating -- 1806: amino acids -- 1807: electrochemical reduction -- 1808: Dalton's atomic theory -- 1811: Avogadro's hypothesis -- 1813: chemical notation -- 1814: Paris green -- 1815: cholesterol -- 1819: caffeine -- 1822: supercritical fluids -- 1828: Beryllium -- 1828: Wöhler's urea synthesis -- 1832: functional groups -- 1834: ideal gas law -- 1834: photochemistry -- 1839: polymers and polymerization -- 1839: daguerreotype -- 1839: rubber -- 1840: ozone -- 1842: phosphate fertilizer -- 1847: nitroglycerine -- 1848: chirality -- 1852: fluorescence -- 1854: separatory funnel -- 1856: Perkin's mauve -- 1856: mirror silvering -- 1859: flame spectroscopy -- 1860: Cannizzaro at Karlsruhe -- 1860: oxidation states -- 1861: Erlenmeyer flask -- 1861: structural formula -- 1864: Solvay process -- 1865: benzene and aromaticity -- 1868: helium -- 1869: the periodic table -- 1874: tetrahedral carbon atoms -- 1876: Gibbs free energy -- 1877: Maxwell-Boltzmann distribution -- 1877: Friedel-Crafts reaction -- 1878: indigo synthesis -- 1879: Soxhlet extractor -- 1881: Fougère Royale -- 1883: Claus process -- 1883: liquid nitrogen -- 1884: Fischer and sugars -- 1885: Le Châtelier's principle -- 1886: isolation of fluorine -- 1886: aluminum -- 1887: cyanide gold extraction -- 1888: liquid crystals -- 1891: thermal cracking -- 1892: chlor-alkali process -- 1892: acetylene -- 1893: thermite -- 1893: borosilicate glass -- 1893: coordination compounds -- 1894: the mole -- 1894: asymmetrical induction -- 1894: diazomethane -- 1895: liquid air -- 1896: greenhouse effect -- 1897: aspirin -- 1897: zymase fermentation -- 1897: hydrogenation -- 1898: neon -- 1900: Grignard reaction -- 1900: free radicals -- 1900: silicones -- 1901: chromatography -- 1902: polonium and radium -- 1905: infrared spectroscopy -- 1907: Bakelite -- 1907: spider silk -- 1909: pH and indicators -- 1909: Haber-Bosch process -- 1909: Salvarsan -- 1912: x-ray crystallography -- 1912: Maillard reaction -- 1912: stainless steel -- 1912: boranes and the vacuum-line technique -- 1912: dipole moments -- 1913: mass spectrometry -- 1913: isotopes -- 1915: chemical warfare -- 1917: surface chemistry -- 1918: Radithor -- 1920: Dean-Stark trap -- 1920: hydrogen bonding -- 1921: tetraethyl lead -- 1923: acids and bases -- 1923: radioactive tracers -- 1925: Fischer-Tropsch process -- 1928: Diels-Alder reaction -- 1928: Reppe chemistry -- 1930: chlorofluorocarbons -- 1931: sigma and pi bonding -- 1931: deuterium -- 1932: carbonic anhydrase -- 1932: vitamin C -- 1932: sulfanilamide -- 1933: polyethylene -- 1934: superoxide -- 1934: the fume hood -- 1935: transition state theory -- 1935: nylon -- 1936: nerve gas -- 1936: technetium -- 1937: cellular respiration -- 1937: elixir sulfanilamide -- 1937: reaction mechanisms -- 1938: catalytic cracking -- 1938: Teflon -- 1939: the last element in nature -- 1939: 'The nature of the chemical bond' -- 1939: DDT -- 1940: gaseous diffusion -- 1942: steroid chemistry -- 1942: cyanoacrylates -- 1943: LSD -- 1943: streptomycin -- 1943: Bari raid -- 1944: Birch reduction -- 1944: magnetic stirring -- 1945: penicillin -- 1945: glove boxes -- 1947: antifolates -- 1947: kinetic isotope effects -- 1947: photosynthesis -- 1948: Donora death fog -- 1949: catalytic reforming -- 1949: molecular disease -- 1949: nonclassical ion controversy -- 1950: conformational analysis -- 1950: cortisone -- 1950: rotary evaporator -- 1951: Sanger sequencing -- 1951: the pill -- 1951: alpha-helix and beta-sheet -- 1951: ferrocene -- 1951: transuranic elements -- 1952: gas chromatography -- 1952: Miller-Urey experiment -- 1952: zone refining -- 1952: thallium poisoning -- 1953: DNA's structure -- 1953: synthetic diamond -- 1955: electrophoresis -- 1956: the hottest flame -- 1957: luciferin -- 1958: DNA replication -- 1960: thalidomide -- 1960: resolution and chiral chromatography -- 1961: NMR -- 1962: green fluorescent protein -- 1962: Noble gas compounds -- 1962: isoamyl acetate and esters -- 1963: Zieger-Natta catalysis -- 1963: Merrifield synthesis -- 1963: dipolar cycloadditions -- 1964: Kevlar -- 1965: protein crystallography -- 1965: cisplatin -- 1965: lead contamination -- 1965: methane hydrate -- 1965: Woodward-Hoffman rules -- 1966: polywater -- 1967: HPLC -- 1968: BZ reaction -- 1969: Murchison meteorite -- 1969: Gore-Tex -- 1970: carbon dioxide scrubbing -- 1970: computational chemistry -- 1970: glyphosate -- 1971: reverse-phase chromatography -- 1972: rapamycin -- 1973: B12 synthesis -- 1974: CFCs and the ozone layer -- 1975: enzyme stereochemistry -- 1976: PET imaging -- 1977: Nozaki coupling -- 1979: tholin -- 1980: iridium impact hypothesis -- 1982: unnatural products -- 1982: MPTP -- 1983: polymerase chain reaction -- 1984: electrospray LC/MS -- 1984: AZT and antiretrovirals -- 1984: quasicrystals -- 1984: Bhopal disaster -- 1985: fullerenes -- 1985: MALDI -- 1988: modern drug discovery -- 1988: PEPCON explosion -- 1989: Taxol -- 1991: carbon nanotubes -- 1994: palytoxin -- 1997: coordination frameworks -- 1998: recrystallization and polymorphs -- 2001: click triazoles -- 2004: graphene -- 2005: shikimic acid shortage -- 2005: olefin metathesis -- 2006: flow chemistry -- 2006: isotopic distribution -- 2009: acetonitrile -- 2010: engineered enzymes -- 2010: metal-catalyzed couplings -- 2013: single-molecule images -- 2025: hydrogen storage -- 2030: artificial photosynthesis.…”
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